The detailed information of tRNA gene sequence


Sequence ID>WENV170685316
Genome IDLFRM01084212
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 294
End posion on genome 369
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
actagtaaac
tRNA gene sequence 
GCTCCGTTAGCTCAGTAGGCAGAGCAACTGACTCTTAATCAGTGGGTCCACGGTTCGATC
CCGTGACGGAGCACCA
Downstream region at tRNA end position 
tgaagaaaaa
Secondary structure (Cloverleaf model)
>WENV170685316	Lys	CTT
                   c      ACCA tgaagaaaaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          C T
                    T     G T G C C     A
      T G A        A      | | | | |     G
    A       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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