The detailed information of tRNA gene sequence


Sequence ID>WENV170685338
Genome IDLFRM01085358
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 584
End posion on genome 658
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaaaagccat
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGCGTCGTTCGGGACGACGAGGCCGCAGGTTCAAA
TCCTGTCACCCCGACgc
Downstream region at tRNA end position 
aggtcgagag
Secondary structure (Cloverleaf model)
>WENV170685338	Pro	CGG
                   t      ACgc aggtcgagag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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