The detailed information of tRNA gene sequence


Sequence ID>WENV170685342
Genome IDLFRM01085719
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 14856
End posion on genome 14943
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgcaaagac
tRNA gene sequence 
GGAGGAGTGGCCGAGCGGCTGAAGGCAGCGGTCTTGAAAACCGCCGATGGGCAACTATCC
GTGAGTTCGAATCTCACCTCCTCCGCCA
Downstream region at tRNA end position 
catttcactt
Secondary structure (Cloverleaf model)
>WENV170685342	Ser	TGA
                   c      GCCA catttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGATGGGCAACTATCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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