The detailed information of tRNA gene sequence


Sequence ID>WENV170685386
Genome IDLFRM01088330
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 408
End posion on genome 483
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcgaagccct
tRNA gene sequence 
GGTCTGTTGGCTCAGTTGGTAGAGCACATCGTTCACATCGATGGGGTCACTGGTTCGAGT
CCAGTACAGACCACCA
Downstream region at tRNA end position 
caaaacctca
Secondary structure (Cloverleaf model)
>WENV170685386	Val	CAC
                   t      ACCA caaaacctca
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        G      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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