The detailed information of tRNA gene sequence


Sequence ID>WENV170685393
Genome IDLFRM01088997
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 644
End posion on genome 719
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gaagaaatat
tRNA gene sequence 
TCCTCAATAGCTCAGTTGGCAGAGCATGCGGCTGTTAACCGCAGGGTCGTTGGTTCGAGC
CCAACTTGAGGAGCCA
Downstream region at tRNA end position 
agggtcttga
Secondary structure (Cloverleaf model)
>WENV170685393	Asn	GTT
                   t      GCCA agggtcttga
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          C G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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