The detailed information of tRNA gene sequence


Sequence ID>WENV170685407
Genome IDLFRM01089817
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 249
End posion on genome 175
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accacctttt
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTTACAGGAGTTCGAATC
TCCTAGGGGTCACCA
Downstream region at tRNA end position 
tttttccttt
Secondary structure (Cloverleaf model)
>WENV170685407	Glu	TTC
                   t      ACCA tttttccttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G A G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TTAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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