The detailed information of tRNA gene sequence


Sequence ID>WENV170685447
Genome IDLFRM01091735
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1378
End posion on genome 1453
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tcttctttat
tRNA gene sequence 
TCCCTGATAGCTCAGTTGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGAGC
CCAGGTCGGGGAGCCA
Downstream region at tRNA end position 
gaatacgaaa
Secondary structure (Cloverleaf model)
>WENV170685447	Asn	GTT
                   t      GCCA gaatacgaaa
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     A - T          C G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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