The detailed information of tRNA gene sequence


Sequence ID>WENV170685452
Genome IDLFRM01092055
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4282
End posion on genome 4355
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gtagggcaat
tRNA gene sequence 
GCCGCCATAGTTCAGTGGTAAAATAGAGCAATGGTAATGCTCAGTCTCGAGTTCGATTCT
CGGTGGCGGCACCA
Downstream region at tRNA end position 
tagacaaatc
Secondary structure (Cloverleaf model)
>WENV170685452	Thr	GGT
                   t      ACCA tagacaaatc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     G G C T C     A
        G A        A      + | | | |     G
      T     C T T G       T C G A G     C
      G       | | +                 T T
      G     A A A T
        T A        A     AGTC
                    G - C
                    A - T
                    G - C
                    C - G
                    A - T
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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