The detailed information of tRNA gene sequence


Sequence ID>WENV170685456
Genome IDLFRM01092226
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1175
End posion on genome 1250
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
tcttgcccaa
tRNA gene sequence 
GCGCTCGTAGCTCAACGGATAGAGCATCTGACTACGGATCAGAAGGTTGGGGGTTCGAAT
CCCTCCGAGCGCGCCA
Downstream region at tRNA end position 
ttcatttccg
Secondary structure (Cloverleaf model)
>WENV170685456	Arg	ACG
                   a      GCCA ttcatttccg
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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