The detailed information of tRNA gene sequence


Sequence ID>WENV170685495
Genome IDLFRM01095467
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 14853
End posion on genome 14928
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gcaaccagat
tRNA gene sequence 
GCCCATGTAGCTCAGTAGGCAGAGCGTCGCCTTGGTAAGGCGGAGGTCACCGGTTCGATC
CCGGTCATGGGCTCCA
Downstream region at tRNA end position 
tttttttagg
Secondary structure (Cloverleaf model)
>WENV170685495	Thr	GGT
                   t      TCCA tttttttagg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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