The detailed information of tRNA gene sequence


Sequence ID>WENV170685514
Genome IDLFRM01096659
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1327
End posion on genome 1402
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
accatttccc
tRNA gene sequence 
GGGACTATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCGAGC
CCTGTTAGTCCCACCA
Downstream region at tRNA end position 
tttacatata
Secondary structure (Cloverleaf model)
>WENV170685514	Val	TAC
                   c      ACCA tttacatata
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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