The detailed information of tRNA gene sequence


Sequence ID>WENV170685523
Genome IDLFRM01096869
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3853
End posion on genome 3778
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position
aaaccgattt
tRNA gene sequence
TCCCCAGTAGCTCAGTCGGTAGAGCAGGTGGCTGTTAACCACCGGGTCCGTGGTTCGAGT
CCGCGCTGGGGAGCCA
Downstream region at tRNA end position
gaatgcattc
Secondary structure (Cloverleaf model)
>WENV170685523	Asn	GTT
                   t      GCCA gaatgcattc
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     G C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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