The detailed information of tRNA gene sequence


Sequence ID>WENV170685545
Genome IDLFRM01097365
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 261
End posion on genome 187
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agtctttcgg
tRNA gene sequence 
GGCCCATTGGTCAAGAGGTTAAGACATCGCCCTTTCACGGCGGTAACGGGGGTTCGATTC
CCCCATGGGTCACCA
Downstream region at tRNA end position 
taaaaattgg
Secondary structure (Cloverleaf model)
>WENV170685545	Glu	TTC
                   g      ACCA taaaaattgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       A C T G       G G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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