The detailed information of tRNA gene sequence


Sequence ID>WENV170685576
Genome IDLFRM01098648
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11956
End posion on genome 11880
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attaatataa
tRNA gene sequence 
CGGGGTGTAGCGCAGTTTGGTAGCGCAACTGGTTTGGGACCAGTGGGCCGCGGGTTCAAA
TCCTGCCACCCCGACCA
Downstream region at tRNA end position 
ttttattaga
Secondary structure (Cloverleaf model)
>WENV170685576	Pro	TGG
                   a      ACCA ttttattaga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C G C G       G C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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