The detailed information of tRNA gene sequence


Sequence ID>WENV170685616
Genome IDLFRM01101418
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 455
End posion on genome 531
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gctgcgttgc
tRNA gene sequence 
GGGGGCGTAGCTCAATTGGTTAGAGCGCTGCCCTGTCACGGCAGAGGTTGCGGGTTCGAG
TCCCGTCGCTTCCGCCA
Downstream region at tRNA end position 
ctctggttca
Secondary structure (Cloverleaf model)
>WENV170685616	Asp	GTC
                   c      GCCA ctctggttca
                     G - C
                     G - C
                     G + T
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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