The detailed information of tRNA gene sequence


Sequence ID>WENV170685640
Genome IDLFRM01102668
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 159
End posion on genome 84
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gagagtaaag
tRNA gene sequence 
GGGTGGTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATC
CCGTCACCACCCACCA
Downstream region at tRNA end position 
ctcgaggtaa
Secondary structure (Cloverleaf model)
>WENV170685640	Val	TAC
                   g      ACCA ctcgaggtaa
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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