The detailed information of tRNA gene sequence


Sequence ID>WENV170685662
Genome IDLFRM01103183
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 220
End posion on genome 294
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gtttggagac
tRNA gene sequence 
AGGCACGTAGCTCAGGGGGAGAGCACTACCTTGACACGGTAGGGGTCGGCGGTTCAATCC
CGCCCGTGCCTACCA
Downstream region at tRNA end position 
tcttattgac
Secondary structure (Cloverleaf model)
>WENV170685662	Val	GAC
                   c      ACCA tcttattgac
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     C C G C C     A
        G A        A      | | | | |     A
      G     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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