The detailed information of tRNA gene sequence


Sequence ID>WENV170685678
Genome IDLFRM01103837
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1811
End posion on genome 1737
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caagggcaac
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA
TCCGTTATTCTCCACtt
Downstream region at tRNA end position 
taaaatgcaa
Secondary structure (Cloverleaf model)
>WENV170685678	Ala	TGC
                   c      ACtt taaaatgcaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T A
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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