The detailed information of tRNA gene sequence


Sequence ID>WENV170685690
Genome IDLFRM01104515
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 117675
End posion on genome 117600
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acagcaaaga
tRNA gene sequence 
GGGCTCGTGGCTTAGCCAGGATATAGCGCTGGGCTTCTAACCCAGACGTCGGGGGTTCAA
ATCCCTTCGAGCCCGCtt
Downstream region at tRNA end position 
tattctctac
Secondary structure (Cloverleaf model)
>WENV170685690	Arg	TCT
                   a      GCtt tattctctac
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      + + | | |     A
  A         T T C G       G G G G G     C
  G           | | |                 T T
  G         T A G C
    A T A          G     ACGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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