The detailed information of tRNA gene sequence


Sequence ID>WENV170685691
Genome IDLFRM01104515
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 111782
End posion on genome 111705
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aacgctctat
tRNA gene sequence 
GGGCGCGTGGCCTAGCCAGGATATGGCGGCAGCCTCCTAAGCTGTAAATCGGGGGTTCAA
ATCCCTTCGCGCCCGCTA
Downstream region at tRNA end position 
atttccttta
Secondary structure (Cloverleaf model)
>WENV170685691	Arg	CCT
                   t      GCTA atttccttta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      + + | | |     A
  A         T C C G       G G G G G     C
  G           | | |                 T T
  G         T G G C
    A T A          G     AAATC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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