The detailed information of tRNA gene sequence


Sequence ID>WENV170685692
Genome IDLFRM01104515
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23489
End posion on genome 23403
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatcctttgT
tRNA gene sequence 
GACGAGATAGCCAAGCCCGGTATGGCGCGGGATTGCTAATCCCGTGATGCTTTGCATCTC
GGGGGTTCGAATCCCCCTCTCGTCGTtc
Downstream region at tRNA end position 
tctttttcaa
Secondary structure (Cloverleaf model)
>WENV170685692	Ser	GCT
                   T      GTtc tctttttcaa
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G G G G G     C
    C       | | | |                 T T
    G       T G G C
      G T A        G     TGATGCTTTGCATCTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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