The detailed information of tRNA gene sequence


Sequence ID>WENV170685716
Genome IDLFRM01105401
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 60
End posion on genome 133
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgtagtaaga
tRNA gene sequence 
GGGCTGGTAGCTCAGGTTGGTAGAGCGTCGCCTTGGCATGGCGGAGGCCCCGGGTTCAAA
TCCCGGCCAGTCCAttc
Downstream region at tRNA end position 
catttctagt
Secondary structure (Cloverleaf model)
>WENV170685716	Ala	GGC
                   a      Attc catttctagt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
      G G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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