The detailed information of tRNA gene sequence


Sequence ID>WENV170685722
Genome IDLFRM01105597
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 109
End posion on genome 182
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gcaccacagT
tRNA gene sequence 
ACATCAGTAGTGTAGCGGTTATCACCGGGCGTTGCCAACGCTCGAACCCGGGTTCGAATC
CCGGCTGATGTATaa
Downstream region at tRNA end position 
caagccttct
Secondary structure (Cloverleaf model)
>WENV170685722	Gly	GCC
                   T      ATaa caagccttct
                     A - T
                     C - G
                     A - T
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | |                 T T
    T       T C A C
      T A          C     GAAC
                    G - C
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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