The detailed information of tRNA gene sequence


Sequence ID>WENV170685736
Genome IDLFRM01106903
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29631
End posion on genome 29705
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tggtgtacgc
tRNA gene sequence 
GCTGCTATAGTGTAGACCGGCCAATCATGTAGGACTCTCACTCCTACGACTGGGGTTCAA
ATCCCCATAGCAGCAttc
Downstream region at tRNA end position 
tgttttttgc
Secondary structure (Cloverleaf model)
>WENV170685736	Glu	CTC
                   c      Attc tgttttttgc
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A C C C C     A
    C A G A        A      | | | | |     A
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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