The detailed information of tRNA gene sequence


Sequence ID>WENV170685744
Genome IDLFRM01107126
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 8865
End posion on genome 8790
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agaaggtttt
tRNA gene sequence 
GTCCCCTTCGTCTAGTGGTCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCAAGT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
tattctcaga
Secondary structure (Cloverleaf model)
>WENV170685744	Glu	TTC
                   t      GCCA tattctcaga
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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