The detailed information of tRNA gene sequence


Sequence ID>WENV170685759
Genome IDLFRM01107647
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 309
End posion on genome 226
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
tcagcgtcgt
tRNA gene sequence 
GCGAGAGTGGCGGAATCGGCAGACGCGCACGTTTGAGGGGCGTGTGGTAATCCCGTACGG
GTTCAAGTCCCGTCTCTCGCACCA
Downstream region at tRNA end position 
gttcggatgt
Secondary structure (Cloverleaf model)
>WENV170685759	Leu	GAG
                   t      ACCA gttcggatgt
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T A A        G      | | | | |     A
    C       G G C G       A C G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGTAATCCCGT
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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