The detailed information of tRNA gene sequence


Sequence ID>WENV170685774
Genome IDLFRM01108212
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3280
End posion on genome 3191
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caacttttgc
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGCGTGTATACGGGTAACCGTA
TCGAGAGTTCGAATCTCTCCTTCACCGCCA
Downstream region at tRNA end position 
tattttattt
Secondary structure (Cloverleaf model)
>WENV170685774	Ser	GGA
                   c      GCCA tattttattt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGGTAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK