The detailed information of tRNA gene sequence


Sequence ID>WENV170685805
Genome IDLFRM01109264
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23912
End posion on genome 23837
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaagcaatat
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAACCGTAGGCTGCGGGTTCGATT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
tcaaaaaagg
Secondary structure (Cloverleaf model)
>WENV170685805	Trp	CCA
                   t      GCCA tcaaaaaagg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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