The detailed information of tRNA gene sequence


Sequence ID>WENV170685828
Genome IDLFRM01110780
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 203
End posion on genome 128
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttttttttat
tRNA gene sequence 
AGGCTAGTGGCACAGCTTGGTTAGCGCGCTCGGCTGATAACCGGGAGGTCATGGGTTCGA
ATCCCATCTAGCCTACtt
Downstream region at tRNA end position 
ttaactgatt
Secondary structure (Cloverleaf model)
>WENV170685828	Ile	GAT
                   t      ACtt ttaactgatt
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C          T A
                    T     T A C C C     A
    T C G A        G      | | | | |     G
  T         C A C G       A T G G G     C
  G         |   | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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