The detailed information of tRNA gene sequence


Sequence ID>WENV170685829
Genome IDLFRM01110889
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2708
End posion on genome 2783
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cgcactcaac
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGCAGGTTCGAAT
CCTGCACGACCCACCA
Downstream region at tRNA end position 
tctttccctg
Secondary structure (Cloverleaf model)
>WENV170685829	Lys	TTT
                   c      ACCA tctttccctg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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