The detailed information of tRNA gene sequence


Sequence ID>WENV170685870
Genome IDLFRM01113115
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 218
End posion on genome 143
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
atatacaaaa
tRNA gene sequence 
GGTCGATTAGCTCAGTTGGTAGAGCGCTACCCTTACAAGGTAGATGTCATAAGTTCGAGT
CTTATATCGACCACCA
Downstream region at tRNA end position 
tttcttaaaa
Secondary structure (Cloverleaf model)
>WENV170685870	Val	TAC
                   a      ACCA tttcttaaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T A T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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