The detailed information of tRNA gene sequence


Sequence ID>WENV170685882
Genome IDLFRM01113951
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1141
End posion on genome 1066
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taatcactgc
tRNA gene sequence 
GAGCCATTAGCTCAGGCGGTAGAGCACCTGACTTTTAATCAGGGTGTCCGGGGTTCGAGT
CCCCGATGGCTCACCA
Downstream region at tRNA end position 
tctctcttaa
Secondary structure (Cloverleaf model)
>WENV170685882	Lys	TTT
                   c      ACCA tctctcttaa
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G C C C C     A
      G G A        A      | | | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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