The detailed information of tRNA gene sequence


Sequence ID>WENV170685893
Genome IDLFRM01114412
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1060
End posion on genome 983
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caagaccaaT
tRNA gene sequence 
GCCCCTTTAGCTCAGTTGGTTAGAGCAGCTGACTCTTAATCAGCGTGTCCAGGGTTCGAA
TCCCTGAGGGGGCACCC
Downstream region at tRNA end position 
gcgagaagcc
Secondary structure (Cloverleaf model)
>WENV170685893	Lys	CTT
                   T      ACCC gcgagaagcc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     T - A          T A
                    T     G T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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