The detailed information of tRNA gene sequence


Sequence ID>WENV170685938
Genome IDLFRM01116650
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1108
End posion on genome 1033
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agctgtaatg
tRNA gene sequence 
GTGGGCGTAGCTCAGTCGGTAGAGCACAGGATTGTGGCTCCTGGTGTCGTGGGTTCGATC
CCCATCGTCCACCCCA
Downstream region at tRNA end position 
tttcagcaaa
Secondary structure (Cloverleaf model)
>WENV170685938	His	GTG
                   g      CCCA tttcagcaaa
                     G - C
                     T - A
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          C T
                    T     T A C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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