The detailed information of tRNA gene sequence


Sequence ID>WENV170685948
Genome IDLFRM01117170
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 18479
End posion on genome 18405
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaccagcgc
tRNA gene sequence 
GGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTC
CCCTATGGGTCACCA
Downstream region at tRNA end position 
ctgaagcagg
Secondary structure (Cloverleaf model)
>WENV170685948	Glu	TTC
                   c      ACCA ctgaagcagg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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