The detailed information of tRNA gene sequence


Sequence ID>WENV170685965
Genome IDLFRM01118017
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2518
End posion on genome 2445
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gccccgccgt
tRNA gene sequence 
TCCCCCATGGTGTAATGGCAGCACACGGGTCTTTGGAACCCTTTGTCTTGGTTCGAGTCC
AGGTGGGGGAGCGA
Downstream region at tRNA end position 
gcctagcgcc
Secondary structure (Cloverleaf model)
>WENV170685965	Gln	TTG
                   t      GCGA gcctagcgcc
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
        A A        G      | + | | |     G
      T     T G T G       C T T G G     C
      G     + | | |                 T T
      G     G C A C
        C A        A     TTGT
                    C   T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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