The detailed information of tRNA gene sequence


Sequence ID>WENV170685975
Genome IDLFRM01118837
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 76426
End posion on genome 76350
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcaggatat
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGCCAGAGCATGCGGTTCATACCCGCAGTGTCGGTGGTTCAAA
TCCACTCGCCGCTACCA
Downstream region at tRNA end position 
ttggaagtga
Secondary structure (Cloverleaf model)
>WENV170685975	Met	CAT
                   t      ACCA ttggaagtga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C A C C     A
      T G A        A      + | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      C C A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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