The detailed information of tRNA gene sequence


Sequence ID>WENV170686021
Genome IDLFRM01121987
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 102065
End posion on genome 101989
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctccacttat
tRNA gene sequence 
CTGCCCGTAGCTCAGCTGGATAGAGCAACGGACTTCTAATCCGTAGGTCGGACGTTCGAA
TCGTCTCGGGCAGGCCA
Downstream region at tRNA end position 
ataataagtt
Secondary structure (Cloverleaf model)
>WENV170686021	Arg	TCT
                   t      GCCA ataataagtt
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C T G C     A
      C G A        A      + | | | |     G
    T       C T C G       G G A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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