The detailed information of tRNA gene sequence


Sequence ID>WENV170686040
Genome IDLFRM01123205
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1775
End posion on genome 1852
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
ctttaaaaac
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATTAGAGTACTTGGCTACGAACCAAGGGGTCGTGGGTTCAA
TTCCTGCCGGGCGCACCA
Downstream region at tRNA end position 
gtattcctaa
Secondary structure (Cloverleaf model)
>WENV170686040	Arg	ACG
                   c      ACCA gtattcctaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C G T C C     A
    T T G A        A      | + + | |     A
  G         C T C G       G T G G G     C
  G         | | | +                 T T
  A         G A G T
    T T A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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