The detailed information of tRNA gene sequence


Sequence ID>WENV170686046
Genome IDLFRM01123353
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4213
End posion on genome 4138
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gttcaagaat
tRNA gene sequence 
GGTGCCATAGCTCAGTTGGTAGAGCAAAGGACTGAAAATCCTTGTGTCCCTGGTTCGATT
CCCGGTGGCACCACAA
Downstream region at tRNA end position 
aaacgcccct
Secondary structure (Cloverleaf model)
>WENV170686046	Phe	GAA
                   t      ACAA aaacgcccct
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     G G C C C     A
      T G A        A      | |   | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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