The detailed information of tRNA gene sequence


Sequence ID>WENV170686082
Genome IDLFRM01125346
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3825
End posion on genome 3899
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcatggacac
tRNA gene sequence 
GGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTC
CCCTATGGGTCACCA
Downstream region at tRNA end position 
ctgaagcagg
Secondary structure (Cloverleaf model)
>WENV170686082	Glu	TTC
                   c      ACCA ctgaagcagg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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