The detailed information of tRNA gene sequence


Sequence ID>WENV170686084
Genome IDLFRM01125595
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4744
End posion on genome 4817
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
ttccatttgc
tRNA gene sequence 
TGGGGGATGGTCTAACGGCAAGACAGCGGACTCTGACTCCGCTTATCGGGGTTCGAATCC
CTGTCCCCCAGCCA
Downstream region at tRNA end position 
cagaaaatca
Secondary structure (Cloverleaf model)
>WENV170686084	Gln	CTG
                   c      GCCA cagaaaatca
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
        A A        G      | + | | |     G
      C     T C T G       C G G G G     C
      G     | | | |                 T T
      G     A G A C
        C A        A     TTAT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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