The detailed information of tRNA gene sequence


Sequence ID>WENV170686090
Genome IDLFRM01125695
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 464
End posion on genome 379
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
acattctctg
tRNA gene sequence 
GGTGGAGTGCCCGAGTGGCTAAAGGGGGCAGACTGTAAATCTGTTGGCTTGCGCCTACGT
TGGTTCGAATCCAACCTCCACCACCA
Downstream region at tRNA end position 
gagagcctaa
Secondary structure (Cloverleaf model)
>WENV170686090	Tyr	GTA
                   g      ACCA gagagcctaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     G
    G       G C C C       G T T G G     C
    G         | | |                 T T
    C       A G G G
      T A A        G     TGGCTTGCGCCTAC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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