The detailed information of tRNA gene sequence


Sequence ID>WENV170686171
Genome IDLFRM01129926
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10396
End posion on genome 10322
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aagaacaggt
tRNA gene sequence 
TCCTCAGTAGCTCAATGGCAGAGCGGCCGGCTGTTAACCGGTAGGTTGCAGGTTCGAGTC
CTGCCTGGGGAGCCA
Downstream region at tRNA end position 
atttttttgt
Secondary structure (Cloverleaf model)
>WENV170686171	Asn	GTT
                   t      GCCA atttttttgt
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C G T C C     A
        A A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     AGGTT
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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