The detailed information of tRNA gene sequence


Sequence ID>WENV170686179
Genome IDLFRM01130041
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4287
End posion on genome 4363
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcatgactgc
tRNA gene sequence 
GGAGCTGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAC
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
taaaatgccg
Secondary structure (Cloverleaf model)
>WENV170686179	Asp	GTC
                   c      GCCA taaaatgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T G C C C     A
      A G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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