The detailed information of tRNA gene sequence


Sequence ID>WENV170686185
Genome IDLFRM01130443
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 29471
End posion on genome 29398
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttattta
tRNA gene sequence 
GGCCGGGTGGCAGAGTGGTCATGCAGCGGATTGCAAATCCGTGAACGCCGGTTCGATTCC
GACCTCGGCCTCCA
Downstream region at tRNA end position 
aatcaaaagc
Secondary structure (Cloverleaf model)
>WENV170686185	Cys	GCA
                   a      TCCA aatcaaaagc
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T T
                    T     C A G C C     A
        G A        G      |   | | |     G
      T     G A C G       G C C G G     C
      G       | | |                 T T
      G     A T G C
        T C        A     GAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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