The detailed information of tRNA gene sequence


Sequence ID>WENV170686236
Genome IDLFRM01133544
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 14187
End posion on genome 14262
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
caagttttat
tRNA gene sequence 
GCTGGTGTAGCTCAGCAGGTAGAGCAGCTGACTTGTAATCAGCAGGTCGGGGGTTCGATT
CCGTCCACCAGCTCCA
Downstream region at tRNA end position 
attaaagtca
Secondary structure (Cloverleaf model)
>WENV170686236	Thr	TGT
                   t      TCCA attaaagtca
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C T G C C     A
      C G A        A      | +   | |     G
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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