The detailed information of tRNA gene sequence


Sequence ID>WENV170686237
Genome IDLFRM01133544
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 14417
End posion on genome 14501
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tatgttatat
tRNA gene sequence 
GGAGGGATTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGTTGGCACCGCCTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
atgttataag
Secondary structure (Cloverleaf model)
>WENV170686237	Tyr	GTA
                   t      ACCA atgttataag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
      T G A        T      | | | | |     G
    G       G C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGGCACCGCCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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