The detailed information of tRNA gene sequence


Sequence ID>WENV170686274
Genome IDLFRM01136682
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11050
End posion on genome 11120
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttatatgaat
tRNA gene sequence 
GCTGAGATGGCGGAAAGGTTACGCAATGGACTGCAGATCCATTCATCCCGGTTCGATTCC
GGGTCTTAGCTtag
Downstream region at tRNA end position 
ggatattatg
Secondary structure (Cloverleaf model)
>WENV170686274	Cys	GCA
                   t      Ttag ggatattatg
                     G - C
                     C - G
                     T - A
                     G + T
                     A - T
                     G - C
                     A - T          T T
                    T     G G G C C     A
        A A        G      | | | | |     G
      A     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     TCAT
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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