The detailed information of tRNA gene sequence


Sequence ID>WENV170686282
Genome IDLFRM01137227
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 867
End posion on genome 795
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atgcactgat
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTTTCATTCTTGAAAGAGGGGTTCGATTC
CCCTATGGGCTACtt
Downstream region at tRNA end position 
ttaaatcaaa
Secondary structure (Cloverleaf model)
>WENV170686282	Glu	TTC
                   t      ACtt ttaaatcaaa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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